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| Caputi, Luigi; Carradec, Quentin; Eveillard, Damien; Kirilovsky, Amos; Pelletier, Eric; Karlusich, Juan J. Pierella; Vieira, Fabio Rocha Jimenez; Villar, Emilie; Chaffron, Samuel; Malviya, Shruti; Scalco, Eleonora; Acinas, Silvia G.; Alberti, Adriana; Aury, Jean-marc; Benoiston, Anne-sophie; Bertrand, Arnaud; Biard, Tristan; Bittner, Lucie; Boccara, Martine; Brum, Jennifer R.; Brunet, Cedric; Busseni, Greta; Carratala, Anna; Claustre, Herve; Coelho, Luis Pedro; Colin, Sbastien; D'Aniello, Salvatore; Da Silva, Corinne; Del Core, Marianna; Dore, Hugo; Gasparini, Stephane; Kokoszka, Florian; Jamet, Jean-louis; Lejeusne, Christophe; Lepoivre, Cyrille; Lescot, Magali; Lima-mendez, Gipsi; Lombard, Fabien; Lukes, Julius; Maillet, Nicolas; Madoui, Mohammed-amin; Martinez, Elodie; Mazzocchi, Maria Grazia; Neou, Mario B.; Paz-yepes, Javier; Poulain, Julie; Ramondenc, Simon; Romagnan, Jean-baptiste; Roux, Simon; Manta, Daniela Salvagio; Sanges, Remo; Speich, Sabrina; Sprovieri, Mario; Sunagawa, Shinichi; Taillandier, Vincent; Tanaka, Atsuko; Tirichine, Leila; Trottier, Camille; Uitz, Julia; Veluchamy, Alaguraj; Vesela, Jana; Vincent, Flora; Yau, Sheree; Kandels-lewis, Stefanie; Searson, Sarah; Dimier, Cline; Picheral, Marc; Bork, Peer; Boss, Emmanuel; De Vargas, Colomban; Follows, Michael J.; Grimsley, Nigel; Guidi, Lionel; Hingamp, Pascal; Karsenti, Eric; Sordino, Paolo; Stemmann, Lars; Sullivan, Matthew B.; Tagliabue, Alessandro; Zingone, Adriana; Garczarek, Laurence; D'Ortenzio, Fabrizio; Testor, Pierre; Not, Fabrice; D'Alcala, Maurizio Ribera; Wincker, Patrick; Bowler, Chris; Iudicone, Daniele; Gorsky, Gabriel; Jaillon, Olivier; Karp-boss, Lee; Krzic, Uros; Ogata, Hiroyuki; Pesant, Stephane; Raes, Jeroen; Reynaud, Emmanuel G.; Sardet, Christian; Sieracki, Mike; Velayoudon, Didier; Weissenbach, Jean. |
| Predicting responses of plankton to variations in essential nutrients is hampered by limited in situ measurements, a poor understanding of community composition, and the lack of reference gene catalogs for key taxa. Iron is a key driver of plankton dynamics and, therefore, of global biogeochemical cycles and climate. To assess the impact of iron availability on plankton communities we explored the comprehensive bio‐oceanographic and ‐omics datasets from Tara Oceans in the context of the iron products from two state‐of‐the‐art global scale biogeochemical models. We obtained novel information about adaptation and acclimation towards iron in a range of phytoplankton, including picocyanobacteria and diatoms, and identified whole sub‐communities co‐varying with... |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00475/58680/61184.pdf |
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| Ferron, Bruno; Kokoszka, Florian; Mercier, Herle; Lherminier, Pascale. |
| A total of 96 finestructure and 30 microstructure full-depth vertical profiles were collected along the A25 Greenland–Portugal Observatoire de la Variabilité Interannuelle et Décennale en Atlantique Nord (OVIDE) hydrographic line in 2008. The microstructure of the horizontal velocity was used to calculate turbulent kinetic energy dissipation rates εvmp, where vmp refers to the vertical microstructure profiler. The lowest dissipation values (εvmp < 0.5 × 10−10 W kg−1) are found below 2000 m in the Iberian Abyssal Plain and in the center of the Irminger basin; the largest values (>5 × 10−10 W kg−1) are found in the main thermocline, around the Reykjanes Ridge, and in a 1000-m-thick layer above the bottom near 48°N. The finestructure of density was used... |
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| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00240/35130/33628.pdf |
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| Kokoszka, Florian; Conversano, Fabio; Ludicone, Daniele; Ferron, Bruno; Bouruet-aubertot, Pascale; Mc Millan, Justine. |
| A dissection of the physics of the seasonal cycle of the oceanic upper layer stratification is necessary to improve climate predictions and to constrain the response of biogeochemical cycles to the climate change. Here we present a time series of vertical profiles of ε, the dissipation rate of turbulent kinetic energy, obtained from a microstructure profiler at a mid-latitude 75m-deep coastal site covering the destratification occurring during the the summer-to-winter. The main signature of the destratification is a progressive deepening of the mixed layer depth (MLD) from September to November, that finally extended to the bottom of the full water-column at the beginning of winter. By grouping the data into temporal and vertical bins we found that the... |
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| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00662/77416/79078.pdf |
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| Blanke, Bruno; Penven, Pierrick; Roy, Claude; Chang, Nicolette; Kokoszka, Florian. |
| This study analyzes the oceanic pathway connecting the Agulhas Bank to the southern Benguela upwelling system by means of a quantitative Lagrangian interpretation of the velocity field calculated by a high-resolution numerical simulation of the ocean around the southwestern tip of Africa. The regional ocean model is forced with National Centers for Environmental Prediction surface winds over 1993-2006 and offers a relevant numerical platform for the investigation of the variability of the water transferred between both regions, both on seasonal and intraseasonal time scales. We show that the intensity of the connection fluctuates in response to seasonal wind variability in the west coast upwelling system, whereas intraseasonal anomalies are mostly related... |
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| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-7388.pdf |
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| Ferron, Bruno; Kokoszka, Florian; Mercier, Herle; Lherminier, Pascale; Huck, Thierry; Rios, Aida; Thierry, Virginie. |
| The variability of the turbulent kinetic energy dissipation due to internal waves is quantified using a finescale parameterisation applied to the A25 Greenland-Portugal transect repeated every two years from 2002 to 2012. The internal wave velocity shear and strain are estimated for each cruise at 91 stations from full depth vertical profiles of density and velocity. The 2002–2012 averaged dissipation rate, <ε2002–2012>, in the upper ocean lies in the range 1–10 × 10-10 W kg-1. At depth, <ε2002–2012> is smaller than 1 × 10-10 W kg-1 except over rough topography found at the continental slopes, the Reykjanes Ridge and in a region delimited by the Azores-Biscay Rise and Eriador Seamount. There, the vertical energy flux of internal waves is... |
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| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00333/44463/44141.pdf |
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